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References

  1. "ALEGRA -- A Framework for Large Strain Rate Physics." https://sherpa.sandia.gov/9231home/alegra/alegra-frame.html
  2. S. Attaway, T. Barragy, K. Brown, D. Gardner, B. Hendrickson, S. Plimpton and C. Vaughan. "Transient Solid Dynamics Simulations on the Sandia/Intel Teraflop Computer." Proceedings of SC'97, San Jose, CA, November, 1997. (Finalist for the Gordon Bell Prize.)
    3. U. Catalyurek and C. Aykanat, "Hypergraph-partitioning-based decomposition for parallel sparse matrix vector multiplication", IEEE Trans. Parallel Dist. Systems, v. 10, no. 7, (1999) pp. 673--693.
  3. P. Baehmann, S. Wittchen, M. Shephard, K. Grice, and M. Yerry. "Robust geometrically based automatic two-dimensional mesh generation." Intl. J. Numer. Meths. Engrg., 24 (1987) 1043-1078.
  4. E.G. Boman, D. Bozdag, U. Catalyurek, A.H. Gebremedhin and F. Manne. "A Scalable Parallel Graph Coloring Algorithm for Distributed Memory Computers". Proceedings of Euro-Par'05, Lisbon, Portugal, August, 2005.
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  7. J. C. Culberson, “Iterated greedy graph coloring and the difficulty landscape” University of Alberta, Tech. Rep. TR 92-07, Jun. 1992
  8. K.D. Devine, E.G. Boman, R. Heaphy, R.H. Bisseling, U.V. Catalyurek. "Parallel Hypergraph Partitioning for Scientific Computing", Proc. of IPDPS'06, Rhodos, Greece, April 2006.
  9. K. Devine, G. Hennigan, S. Hutchinson, A. Salinger, J. Shadid, and R. Tuminaro. "High Performance MP Unstructured Finite Element Simulation of Chemically Reacting Flows." Proceedings of SC'97, San Jose, CA, November, 1997. (Finalist for the Gordon Bell Prize.)
  10. K.D. Devine, E.G. Boman, R.T. Heaphy, B.A. Hendrickson, J.D. Teresco, J. Faik, J.E. Flaherty, and L.G. Gervasio. "New challenges in dynamic load balancing." Williams College Department of Computer Science Technical Report CS-04-02, and Sandia Report SAND2004-1496J, Sandia National Laboratories, 2004. Submitted to Applied Numerical Mathematics.
  11. H.C. Edwards. A parallel infrastructure for scalable adaptive finite element methods and its application to least squares  C^(inf) collocation.  Ph.D. Dissertation, Univ. of Texas at Austin, May, 1997.
  12. J. Faik, J.E. Flaherty, L.G. Gervasio, J.D. Teresco, K,D. Devine, and E.G. Boman. "A model for resource-aware load balancing on heterogeneous clusters." Williams College Department of Computer Science Technical Report CS-04-03, and Sandia Report SAND2004-2145C, Sandia National Laboratories, 2004. Presented at Cluster '04.
  13. J. Flaherty, R. Loy, M. Shephard, B. Szymanski, J. Teresco and L. Ziantz. "Adaptive local refinement with octree load-balancing for the parallel solution of three-dimensional conservation laws." J. Parallel Distrib. Comput., 47 (1998) 139-152.
  14. L. Gervasio. "Final Report." Summer project report, Internal Memo, Department 9103, Sandia National Laboratories, August, 1998.
  15. B. Hendrickson and K. Devine. "Dynamic load balancing in computational mechanics." Comp. Meth. Appl. Mech. Engrg., v. 184 (#2-4), p. 485-500, 2000.
  16. B. Hendrickson and T.G. Kolda. "Partitioning rectangular and structurally nonsymmetric sparse matrices for parallel computation", SIAM J. on Sci. Comp., v. 21, no. 6, 2001, pp. 2048-2072.
  17. B. Hendrickson and R. Leland. "The Chaco user's guide, version 2.0." Tech. Rep. SAND 94-2692, Sandia National Laboratories, Albuquerque, NM, October, 1994. http://cs.sandia.gov/CRF/chac.html
  18. G. Karypis and V. Kumar. "ParMETIS: Parallel graph partitioning and sparse matrix ordering library." Tech. Rep. 97-060, Department of Computer Science, Univ. of Minnesota, 1997. https://www-users.cs.umn.edu/~karypis/metis/parmetis/
  19. R. Loy. Adaptive local refinement with octree load-balancing for the parallel solution of three-dimensional conservation laws. Ph. D. Dissertation, Dept. of Computer Science, Rensselaer Polytechnic Institute, May 1998.
  20. S. Mitchell and S. Vavasis. "Quality mesh generation in three dimensions." Proc. 8th ACM Symposium on Computational Geometry, ACM (1992) 212-221.
  21. W. F. Mitchell. "A Fortran 90 Interface for OpenGL: Revised January 1998" NISTIR 6134 (1998). https://math.nist.gov/~mitchell/papers/nistir6134.ps.gz
  22. W.F. Mitchell. "A Refinement-tree Based Partitioning Method for Dynamic Load Balancing with Adaptively Refined Grids." Journal of Parallel and Distributed Computing, Volume 67, Issue 4, April 2007, Pages 417-429.
  23. "MPSalsa: Massively Parallel Numerical Methods for Advanced Simulation of Chemically Reacting Flows." http://cs.sandia.gov/CRF/MPSalsa/
  24. A. Patra and J. T. Oden. "Problem decomposition for adaptive hp-finite element methods." J. Computing Systems in Engrg., 6 (1995).
  25. J. Pilkington and S. Baden. "Partitioning with space-filling curves." Tech. Rep. CS94-349, Dept. of Computer Science and Engineering, Univ. of California, San Diego, CA, 1994.
  26. A. E. Sariyuce, E. Saule, U. V. Catalyurek. "Improving Graph Coloring on Distributed Memory Parallel Computers" Proceedings of the 18th Annual International Conference on High Performance Computing (HiPC 2011), 2011, to appear.
  27. M. Shephard and M. Georges. "Automatic three-dimensional mesh generation by the finite octree technique." Intl. J. Numer. Meths. Engrg., 32 (1991) 709-749.
  28. V. E. Taylor and B. Nour-Omid. "A Study of the Factorization Fill-in for a Parallel Implementation of the Finite Element Method." Intl. J. Numer. Meths. Engrg., 37 (1994) 3809-3823.
  29. J. D. Teresco, J. Faik, and J. E. Flaherty. "Resource-Aware Scientific Computation on a Heterogeneous Cluster." Computing in Science & Engineering, To appear, 2005.
  30. J. D. Teresco, J. Faik, and J. E. Flaherty. "Hierarchical Partitioning and Dynamic Load Balancing for Scientific Computation." Williams College Department of Computer Science Technical Report CS-04-04, and Sandia Report SAND2004-1559A, Sandia National Laboratories, 2004. Submitted to Proc. PARA'04 Workshop on State-Of-The-Art in Scientific Computing.
  31. C. Walshaw. "JOSTLE mesh partitioning software", https://www.gre.ac.uk/jostle/
  32. C. Walshaw, M. Cross, and M. Everett. "Parallel Dynamic Graph Partitioning for Adaptive Unstructured Meshes", J. Par. Dist. Comp., 47(2) 102-108, 1997.
  33. M. Warren and J. Salmon. "A parallel hashed octree n-body algorithm." Proc. Supercomputing `93, Portland, OR, November 1993.
  34. R. D. Williams. "Performance of dynamic load balancing algorithms for unstructured mesh calculations. Concurrency, Practice, and Experience, 3(5), 457-481, 1991.
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